MIRA DKG

MIRA DKG provides access and queries to a domain knowledge graph. The grounding service has 239488 terms.

UI

Lookup

View information for an entity in the domain knowledge graph based on its compact URI (CURIE) such as vaccine with /entity/vo:0000001.

API

Grounding

Identify a standard database identifier for a string using GET request to /ground/<text> to see grounding results such as /api/ground/vaccine

Summary

The DKG has 233,800 nodes. This is broken down by the following namespaces/metaclasses:

geonames: 54,549 umls: 19,285 hp: 18,727 cido: 17,191 vo: 13,522 doid: 11,600 oae: 9,410 fbbt: 7,554 ncit: 7,126 pr: 6,892 omim: 5,982 uniprot: 5,806 snomedct: 4,537 pubmed: 4,444 ncbitaxon: 4,316 mesh: 4,030 chebi: 2,548 icd10cm: 2,444 icd9cm: 2,414 gard: 2,123 orphanet.ordo: 2,120 vsmo: 1,902 uberon: 1,589 idomal: 1,461 go: 1,321 wikidata: 1,090 miro: 1,081 ndfrt: 1,034 unit: 1,001 symp: 895 vfb: 719 fma: 679 ovae: 630 apollosv: 626 emapa: 609 dto: 561 kegg: 542 iuphar.receptor: 457 probonto: 448 icdo: 432 ma: 420 ehdaa2: 399 cas: 376 efo: 372 ro: 351 obi: 350 vhog: 347 bto: 338 zfa: 324 ido: 321 tao: 312 ehdaa: 296 obo: 294 xao: 292 aao: 287 iao: 274 cl: 255 so: 253 caloha: 227 opl: 170 galen: 167 drugbank: 158 ev: 144 drugcentral: 141 mat: 140 meddra: 133 opmi: 133 pirsf: 128 hmdb: 128 bfo: 127 dron: 123 metacyc.compound: 116 lincs.smallmolecule: 112 cemo: 111 aeo: 97 envo: 93 caro: 89 constant: 89 pato: 79 ftt: 76 bila: 70 ogg: 70 foodon: 60 vsao: 60 geogeo: 51 idocovid19: 44 omrse: 42 oboinowl: 41 hao: 40 tgma: 38 vido: 36 chemidplus: 33 icd10: 32 trans: 32 iuphar.family: 31 lipidmaps: 31 tgn: 31 umbbd.compound: 31 wbbt: 30 geno: 29 chemspider: 26 ogms: 23 ymdb: 23 ecmdb: 20 gfo: 20 askemo: 19 bspo: 18 dhba: 18 stato: 17 omo: 17 hba: 15 neuronames: 15 plo: 14 ppdb: 14 uo: 13 eco: 13 obcs: 13 mba: 13 chembl: 11 dc: 11 hprd: 11 tads: 11 hgnc: 11 ensembl: 10 vsdb: 10 mmusdv: 10 mp: 10 wbls: 10 debio: 9 dmba: 9 fbdv: 9 commoncoreontology: 8 disdriv: 8 doi: 8 hsapdv: 8 ero: 8 sio: 8 owl: 8 zfs: 7 birnlex: 6 mpath: 6 mro: 6 orphanet: 6 rdfs: 5 skos: 5 omiabis: 5 bpdb: 4 dcterms: 4 viralzone: 4 exo: 4 icd11: 4 snap: 4 gc: 4 spd: 4 eccode: 3 mf: 3 mondo: 3 pba: 3 pco: 3 pdumdv: 3 wikipedia.en: 3 dpo: 2 resid: 2 mfmo: 2 mi: 2 uniprot.isoform: 2 bioportal: 1 cmo: 1 covoc: 1 dbo: 1 upheno: 1 ehda: 1 icd9: 1 ico: 1 isbn: 1 sdgio: 1 foaf: 1 obib: 1 gaz: 1 olatdv: 1 tcdb: 1 nbo: 1 omit: 1 pdb: 1 umbbd.enzyme: 1 umbbd.pathway: 1 gsso: 1